Another Word For It Patrick Durusau on Topic Maps and Semantic Diversity

April 9, 2011

graph-tool

Filed under: Graphs,Visualization — Patrick Durusau @ 3:42 pm

graph-tool

From the website:

graph-tool is an efficient python module for manipulation and statistical analysis of graphs (a.k.a. networks). With graph-tool you can do the following:

  • Easily create directed or undirected graphs and manipulate them in an arbitrary fashion, using the convenience and expressiveness of the python language!
  • Associate arbitrary information to the vertices, edges or even the graph itself, by means of property maps.
  • Filter vertices and/or edges “on the fly”, such that they appear to have been removed from the graph, but can be easily recovered.
  • Instantaneously reverse the edge direction of directed graphs, and easily transform directed graphs into undirected, and vice-versa.
  • Save and load your graphs from files using the graphml and dot file formats, which provide interoperability with other software. You can also pickle your graphs at will!
  • Conveniently draw your graphs, using a variety of algorithms and output formats (including to the screen). graph-tool works as a very comfortable interface to the excellent graphviz package.
  • Collect all sorts of statistics: degree/property histogram, combined degree/property histogram, vertex-vertex correlations, assortativity, average vertex-vertex shortest distance, etc.
  • Run several topological algorithms on your graphs, such as isomorphism, minimum spanning tree, connected components, dominator tree, maximum flow, etc.
  • Generate random graphs, with arbitrary degree distribution and degree correlation.
  • Calculate clustering coefficients, motif statistics, communities, centrality measures, etc.
  • Ad-hoc compilation and execution of C++ code, for efficient implementation of throw-away code for specific projects.
  • And probably more stuff I’m forgetting…

Now there’s a feature list!

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