Another Word For It Patrick Durusau on Topic Maps and Semantic Diversity

March 4, 2014

PLOS’ Bold Data Policy

Filed under: Data,Open Access,Open Data,Public Data — Patrick Durusau @ 11:32 am

PLOS’ Bold Data Policy by David Crotty.

From the post:

If you pay any attention at all to scholarly publishing, you’re likely aware of the current uproar over PLOS’ recent announcement requiring all article authors to make their data publicly available. This is a bold move, and a forward-looking policy from PLOS. It may, for many reasons, have come too early to be effective, but ultimately, that may not be the point.

Perhaps the biggest practical problem with PLOS’ policy is that it puts an additional time and effort burden on already time-short, over-burdened researchers. I think I say this in nearly every post I write for the Scholarly Kitchen, but will repeat it again here: Time is a researcher’s most precious commodity. Researchers will almost always follow the path of least resistance, and not do anything that takes them away from their research if it can be avoided.

When depositing NIH-funded papers in PubMed Central was voluntary, only 3.8% of eligible papers were deposited, not because people didn’t want to improve access to their results, but because it wasn’t required and took time and effort away from experiments. Even now, with PubMed Central deposit mandatory, only 20% of what’s deposited comes from authors. The majority of papers come from journals depositing on behalf of authors (something else for which no one seems to give publishers any credit, Kent, one more for your list). Without publishers automating the process on the author’s behalf, compliance would likely be vastly lower. Lightening the burden of the researcher in this manner has become a competitive advantage for the journals that offer this service.

While recognizing the goal of researchers to do more experiments, isn’t this reminiscent of the lack of documentation for networks and software?

That creators of networks and software want to get on with the work they enjoy, documentation not being part of that work.

The problem with the semantics of research data, much as it is with network and software semantics, it there is no one else to ask about its semantics. If researchers don’t document those semantics as they perform experiments, then they will have to spend the time at publication to gather that information together.

I sense an opportunity here for software to assist researchers in capturing semantics as they perform experiments, so that production of semantically annotated data at the end of an experiment can be largely a clerical task, subject to review by the actual researchers.

The minimal semantics that needs to be captured for different type of research will vary. That is all the more reason to research and document those semantics before anyone writes a complex monolith of semantics into which existing semantics must be shoe horned.

Reasoning if we don’t know the semantics of data, it is more cost effective to pipe it to /dev/null.

I first saw this in a tweet by ChemConnector.

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