Another Word For It Patrick Durusau on Topic Maps and Semantic Diversity

August 2, 2013

Interestingly: the sentence adverbs of PubMed Central

Filed under: Natural Language Processing — Patrick Durusau @ 4:20 pm

Interestingly: the sentence adverbs of PubMed Central by Neil Saunders.

From the post:

Scientific writing – by which I mean journal articles – is a strange business, full of arcane rules and conventions with origins that no-one remembers but to which everyone adheres.

I’ve always been amused by one particular convention: the sentence adverb. Used with a comma to make a point at the start of a sentence, as in these examples:

Surprisingly, we find that the execution of karyokinesis and cytokinesis is timely…
Grossly, the tumor is well circumscribed with fibrous capsule…
Correspondingly, the short-term Smad7 gene expression is graded…

The example that always makes me smile is interestingly. “This is interesting. You may not have realised that. So I said interestingly, just to make it clear.”

With that in mind, let’s go looking for sentence adverbs in article abstracts.

Great example of parsing PubMed abstracts (~47 GB uncompressed) for adverbs, with Ruby and analyzing the results with R.

I have something similar coming up this weekend. Searching a standards corpus for keyword usage consistency.

I think I know the answer but having a file with every instance will be a lot more convincing. 😉

What tools do you use to explore texts?

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